Structure of PDB 6utk Chain H

Receptor sequence

>6utkH (length=231) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVQSGAEVRKPGSSVTISCKPVGGTFTNFAIHWVRQAPGQGLEWVGG
RVPVVGIYKYGKKFHDRLRLYEDDPMKTVFLELRSLTSDDTGVYYCTRWR
GCGMCPYDTSSYYNDASDVWGPGTKVIVSAASTKGPSVFPLAPSSKSGGT
AALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVP
SSSLGTQTYICNVNHKPSNTKVDKKVEPKSC

3D structure

PDB

6utk A VH1-69 antibody lineage from an infected Chinese donor potently neutralizes HIV-1 by targeting the V3 glycan supersite

Chain

Resolution

3.8 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	BMA	H	G55 Y57	G56 Y58
BS02	MAN	H	Y100H N100J D100K	Y112 N114 D115

External links

PDB	RCSB:6utk, PDBe:6utk, PDBj:6utk
PDBsum	6utk
PubMed

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