Structure of PDB 6snd Chain H

Receptor sequence

>6sndH (length=224) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVESGPGLVQPWGTLSLTCRVSGDSVSNDNYYWAWIRQTPGRELQVI
GTIYYSGTTYYNPSLRNRVTISLDKSVNVVSLRLGSVSAADTAQYYCVRM
PSHGFWSTSFSYWYFDLWGRGHFVAVSWASTKGPSVFPLAPSGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYICNVDHKPSNTKVDKKVEPKS

3D structure

PDB

6snd Structural Basis for Broad HIV-1 Neutralization by the MPER-Specific Human Broadly Neutralizing Antibody LN01.

Chain

Resolution

3.1 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	T50 Y58 F100 W100A F100E S100F W100H	T52 Y60 F105 W106 F110 S111 W113
BS02	PSF	H	D32 G99 W100A	D32 G104 W106

External links

PDB	RCSB:6snd, PDBe:6snd, PDBj:6snd
PDBsum	6snd
PubMed	31653484

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