Structure of PDB 6o42 Chain H

Receptor sequence

>6o42H (length=220) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGG
IIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREG
EGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSGGTAALGCLVKD
YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
ICNVNHKPSNTKVDKKVEPK

3D structure

PDB

6o42 An MPER antibody neutralizes HIV-1 using germline features shared among donors.

Chain

Resolution

2.6 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	S31 G50 I52 I53 F54 N58 E95 G100A K100B P100C R100E	S31 G50 I52 I54 F55 N59 E99 G105 K106 P107 R109

External links

PDB	RCSB:6o42, PDBe:6o42, PDBj:6o42
PDBsum	6o42
PubMed	31772165

[Back to BioLiP]