Structure of PDB 6fzr Chain H

Receptor sequence

>6fzrH (length=226) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLQESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAE
IRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTG
VGQFAYWGQGTTVTVSDIVVTQESALTTSPGETVTLTCRSSTGAVTTSNY
ANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTED
EAIYFCALWYSNHWVFGGGTKLTVLG

3D structure

PDB

6fzr Water Sculpts the Distinctive Shapes and Dynamics of the Tumor-Associated Carbohydrate Tn Antigens: Implications for Their Molecular Recognition.

Chain

Resolution

1.8 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	N31 Y32 W33 Q103 Y1041 W1100	N31 Y32 W33 Q103 Y150 W209

External links

PDB	RCSB:6fzr, PDBe:6fzr, PDBj:6fzr
PDBsum	6fzr
PubMed	30004703

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