Structure of PDB 6dmf Chain H

Receptor sequence
>6dmfH (length=514) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
IDPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTL
DNNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSI
ITDTYGDAPFSEAGLFNPKYDKQEDIYNAFFLELEDAVNKIDPTKDKVTG
DLIYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGGVIT
DASSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLCSTF
FNQLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFSPRD
PGAYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKSDNP
GVVMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNYGCT
ATTDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANVRRS
GYPKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIERMGG
TDNWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainH
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC H E60 R95 E22 R57
BS02 BGC H E60 N78 N281 E22 N40 N237
BS03 MG H R492 D555 E557 R448 D511 E513
External links