Structure of PDB 6cxl Chain H

Receptor sequence

>6cxlH (length=218) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVAS
ISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKG
SDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSGTAALGCLVKDYF
PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYIC
NVNHKPSNTKVDKKVEPK

3D structure

PDB

6cxl Oligomannose Glycopeptide Conjugates Elicit Antibodies Targeting the Glycan Core Rather than Its Extremities.

Chain

Resolution

3.586 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	H	A31 D100B	A31 D106
BS02	MAN	H	A31 H32 T33 K95 S100A D100B N100C D100D	A31 H32 T33 K99 S105 D106 N107 D108

External links

PDB	RCSB:6cxl, PDBe:6cxl, PDBj:6cxl
PDBsum	6cxl
PubMed	30834312

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