Structure of PDB 6cbj Chain H

Receptor sequence

>6cbjH (length=224) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVQSGAELKKPGASVKVSCKASGYTLSDYYVHWLRQAPGQGLEWVAW
INPTSGRTISPRKFQGRVTMTTDTSMNVAYMELRGLRSDDTAVYFCARGG
WISLYVDYSYYPNFDSWGQGTLVSVSGASTKGPSVFPLAPSGTAALGCLV
KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQ
TYICNVNHKPSNTKVDKRVEPKSC

3D structure

PDB

6cbj HIV envelope V3 region mimic embodies key features of a broadly neutralizing antibody lineage epitope.

Chain

Resolution

2.85 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	H	Y108 Y111	Y108 Y111
BS02	MAN	H	Y27 T28 D31	Y27 T28 D31

External links

PDB	RCSB:6cbj, PDBe:6cbj, PDBj:6cbj
PDBsum	6cbj
PubMed	29549260
UniProt	S6C4S0

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