Structure of PDB 6b3k Chain H

Receptor sequence

>6b3kH (length=225) Species: 10090 (Mus musculus) [Search protein sequence]

EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVAS
ISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQG
YRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYICNVNHKPSNTKVDKKVEPKSC

3D structure

PDB

6b3k Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography.

Chain

Resolution

2.09 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	H	Y34 S55 P56 Y57 S58 S60 Q102 Y104 R105 R110	Y31 S52 P53 Y54 S55 S57 Q99 Y101 R102 R107	PDBbind-CN: Kd=120nM
BS02	MG	H	L190 S191	L187 S188

External links

PDB	RCSB:6b3k, PDBe:6b3k, PDBj:6b3k
PDBsum	6b3k
PubMed	29309709

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