Structure of PDB 5t4z Chain H

Receptor sequence

>5t4zH (length=227) Species: 9544 (Macaca mulatta) [Search protein sequence]

QVTLKEFGPALVKPTQPLTLTCSFSGFSLRSSDTAVVWIRQPPGKALEWL
AAIYWDDVEHINPSLKSRLSISKDSPNSLVVLTMANMDPVDTATYYCGRV
RFVSGGYYTDRIDSWGPGLLVTVSSASTKGPSVFPLAPSTSESTAALGCL
VKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYVCNVNHKPSNTKVDKRVEIKTCGG

3D structure

PDB

5t4z Vaccine Elicitation of High Mannose-Dependent Neutralizing Antibodies against the V3-Glycan Broadly Neutralizing Epitope in Nonhuman Primates.

Chain

Resolution

1.991 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	H	Y52 W53 D54 G100	Y54 W55 D56 G105
BS02	MAN	H	Y52 H58 Y100C D100E	Y54 H60 Y108 D110

External links

PDB	RCSB:5t4z, PDBe:5t4z, PDBj:5t4z
PDBsum	5t4z
PubMed	28249163

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