Structure of PDB 5omx Chain H

Receptor sequence
>5omxH (length=95) Species: 8355 (Xenopus laevis) [Search protein sequence]
RKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASR
LAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
3D structure
PDB5omx Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability.
ChainH
Resolution2.32 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna H K31 K34 S36 K2 K5 S7
BS02 dna H R30 T32 S55 S56 R86 S87 T88 R1 T3 S26 S27 R57 S58 T59
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5omx, PDBe:5omx, PDBj:5omx
PDBsum5omx
PubMed29113904
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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