Structure of PDB 5mps Chain H

Receptor sequence
>5mpsH (length=401) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
IKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRNIICKNV
VDFTLNKQNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFNRKD
YVSCGNILQCLSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKICGW
KLALVSKKTHDMIWEKLRYILQTQELSSTLRESLETLFEIRQKDYKSCEN
FNELTMAFDTLRQKLVEFKKKIYLVLKSSLSGDEAAHKLLKLKIANNLKK
SVVDIIIKSSLQESTFSKFYSILSERMITFHRSWQTAYNETFEQNYTQDI
EDYETDQLRILGKFWGHLISYEFLPMDCLEESCPQGRIFIKFLFQELVNE
LGLDELQLRLNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSR
L
3D structure
PDB5mps Structure of a spliceosome remodelled for exon ligation.
ChainH
Resolution3.85 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H K316 K322 F353 H354 K243 K249 F280 H281
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0003723 RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005684 U2-type spliceosomal complex
GO:0005737 cytoplasm
GO:0071013 catalytic step 2 spliceosome

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5mps, PDBe:5mps, PDBj:5mps
PDBsum5mps
PubMed28076345
UniProtP53333|CWC22_YEAST Pre-mRNA-splicing factor CWC22 (Gene Name=CWC22)

[Back to BioLiP]