Structure of PDB 5mdz Chain H

Receptor sequence
>5mdzH (length=130) Species: 562 (Escherichia coli) [Search protein sequence]
ALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVY
MRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAK
ANAKFEVKAAAFEGELIPASQIDRLATLPT
3D structure
PDB5mdz Translational termination without a stop codon.
ChainH
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H N4 D29 S30 R31 G32 V33 T34 M38 L41 V54 R56 L59 R61 L81 N3 D28 S29 R30 G31 V32 T33 M37 L40 V53 R55 L58 R60 L80
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0043022 ribosome binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0006417 regulation of translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5mdz, PDBe:5mdz, PDBj:5mdz
PDBsum5mdz
PubMed27934701
UniProtP0A7J3|RL10_ECOLI Large ribosomal subunit protein uL10 (Gene Name=rplJ)

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