Structure of PDB 5l30 Chain H

Receptor sequence
>5l30H (length=251) Species: 9606 (Homo sapiens) [Search protein sequence]
IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWR
NLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPV
VLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNV
PRLMTQDCLQQSRDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGT
WYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPGVLLRAPF
P
3D structure
PDB5l30 Synthesis and P1' SAR exploration of potent macrocyclic tissue factor-factor VIIa inhibitors.
ChainH
Resolution1.73 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.21: coagulation factor VIIa.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 70A H H57 C58 K60A G97 T99 D189 S190 K192 S195 S214 W215 G216 Q217 G219 H41 C42 K45 G85 T87 D183 S184 K186 S189 S208 W209 G210 Q211 G212 PDBbind-CN: -logKd/Ki=9.14,Ki=0.72nM
BindingDB: Ki=0.12nM
BS02 CA H E70 D72 E75 E80 E58 D60 E63 E68
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function

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Biological Process
External links
PDB RCSB:5l30, PDBe:5l30, PDBj:5l30
PDBsum5l30
PubMed27612545
UniProtP08709|FA7_HUMAN Coagulation factor VII (Gene Name=F7)

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