Structure of PDB 5e08 Chain H

Receptor sequence
>5e08H (length=229) Species: 9606 (Homo sapiens) [Search protein sequence]
EVQLVESGGGLVQPGGSLRLSCAASGFSISSSYIHWVRQAPGKGLEWVAY
IYPYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYY
SSGGSYYRYSRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYICNVNHKPSNTKVDKKVEPKSCDKTH
3D structure
PDB5e08 Specific Recognition of a Single-Stranded RNA Sequence by a Synthetic Antibody Fragment.
ChainH
Resolution2.38 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H Y53 Y55 Y56 R99 Y100 Y101 S102 S103 G104 Y107 Y108 R109 S111 G113 D115 Y52 Y54 Y55 R98 Y99 Y100 S101 S102 G103 Y106 Y107 R108 S110 G112 D114 PDBbind-CN: Kd=10nM
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