Structure of PDB 5dst Chain H

Receptor sequence
>5dstH (length=317) Species: 9606 (Homo sapiens) [Search protein sequence]
DSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSM
FAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVE
KVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIE
DRQYKDFKIHWWENVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKE
VDIYTVKTEELSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHKKMGFSTA
PDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLD
FKGQLCETSVSNDYKMR
3D structure
PDB5dst Novel helical assembly in arginine methyltransferase 8
ChainH
Resolution2.963 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D92 E185 E194 H334
Catalytic site (residue number reindexed from 1) D15 E108 E117 H257
Enzyme Commision number 2.1.1.319: type I protein arginine methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAH H Y80 M89 R95 G119 S120 I124 L125 E141 C142 V169 M196 Y3 M12 R18 G42 S43 I47 L48 E64 C65 V92 M119
Gene Ontology
Molecular Function
GO:0016274 protein-arginine N-methyltransferase activity
Biological Process
GO:0018216 peptidyl-arginine methylation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5dst, PDBe:5dst, PDBj:5dst
PDBsum5dst
PubMed26876602
UniProtQ9NR22|ANM8_HUMAN Protein arginine N-methyltransferase 8 (Gene Name=PRMT8)

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