Structure of PDB 5dd0 Chain H

Receptor sequence

>5dd0H (length=221) Species: 9544 (Macaca mulatta) [Search protein sequence]

QVQLQESGPGLVKPSETLSVTCAVSGVSFSSFWWGWIRQSPGKGLEWIGT
IYGSSGRGEYNPSLKSRTTISRDTSKSQISLELTSVTAADTAIYYCSRGL
FQPNGFSFTLTSYWFDVWGPGVPVTVSSASTKGPSVFPLAPSTAALGCLV
KDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQ
TYVCNVNHKPSNTKVDKRVEI

3D structure

PDB

5dd0 Initiation of immune tolerance-controlled HIV gp41 neutralizing B cell lineages.

Chain

Resolution

2.488 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	W33 Y52 S55 R57 G58 E59 F101 F108 L110	W33 Y52 S55 R57 G58 E59 F101 F108 L110

External links

PDB	RCSB:5dd0, PDBe:5dd0, PDBj:5dd0
PDBsum	5dd0
PubMed	27122615

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