Structure of PDB 5a2k Chain H

Receptor sequence
>5a2kH (length=225) Species: 10090 (Mus musculus) [Search protein sequence]
QVQLQESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAE
IRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTG
VGQFAYWGQGTTVTVSIVVTQESALTTSPGETVTLTCRSSTGAVTTSNYA
NWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDE
AIYFCALWYSNHWVFGGGTKLTVLG
3D structure
PDB5a2k Deciphering the Non-Equivalence of Serine and Threonine O-Glycosylation Points: Implications for Molecular Recognition of the Tn Antigen by an Anti-Muc1 Antibody.
ChainH
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide H N31 Y32 W33 Q97 Y1032 W1091 W1096 N31 Y32 W33 Q103 Y149 W208 W213
Gene Ontology
Biological Process
GO:0002250 adaptive immune response
GO:0006955 immune response
Cellular Component
GO:0005615 extracellular space
GO:0019814 immunoglobulin complex

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Biological Process
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Cellular Component
External links
PDB RCSB:5a2k, PDBe:5a2k, PDBj:5a2k
PDBsum5a2k
PubMed26118689
UniProtP01727;
P01801|HVM32_MOUSE Ig heavy chain V-III region J606

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