Structure of PDB 4zto Chain H

Receptor sequence

>4ztoH (length=221) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

QSLEESGGGPVKPGGTLTLTCKASGIDFSSFYYMCWVRQAPGKGLEWIAC
IVTDITGESYYATWAKGRFAISKTSSTTVTLQMTSLTAADTATYFCARGD
TYGYGDTVYALNLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLG
CLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQ
PVTCNVAHPATNTKVDKTVAP

3D structure

PDB

4zto Structural analysis of a novel rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region critical for receptor and co-receptor binding.

Chain

Resolution

2.3 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	F31 D51B T53 E55 T96 Y97	F31 D54 T56 E58 T101 Y102

External links

PDB	RCSB:4zto, PDBe:4zto, PDBj:4zto
PDBsum	4zto
PubMed	26251831

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