Structure of PDB 4v59 Chain H

Receptor sequence
>4v59H (length=2060) Species: 5541 (Thermomyces lanuginosus) [Search protein sequence]
QSLRPLVLTHGSLEFSFLVPTSLHFQAAQLKDSFLATLPQPTEELAQDDE
PSSVVELVARYIAFVAHEVDEGDEDAHPTNLEVLKLILNEFERAFMRGND
VHAIAANVAGITAKKIGVVRAYYAGRAAAGRAPKPYDSALFRAAAENNVK
IYSIFGGQGNIEEYFDELREIYTTYPSFVEDLITSIAELLQSLAREWDAV
KQYPKGLDILQWLHNPESQPDTDYLVSAPVSFPLIGLVQLAHYMITCKTL
GREPGELLERFSGTTGHSQGIVVAAAIATARTWDEFATAAKRAVELLFWI
GLRSQQAYPRTSLAPSTLQDSVENGEGTPTPMLSIRDLTRSAVQEHIDAT
NQHLPEDRHIGISLVNSARNFVVTGPPISLYGLNLRLRKVKAPTGLDQNR
IPFTQRKARFVNRFLPITAPFHSPYLAGAHAHILGDVDDMKIPASSLVIP
VYDTKTGQDLRELGDEDIIPELVRMITYDPVNWETATVFPDATHIVDFGP
GGVSGIGVLTNRNKDGTGVRVILAGAIDGTNTEVGYKPELFDRDDNAVQF
AVDWVKEHGPRLVKTSVGQTFVDTKMSRLLGVPPVMVAGMTPTTVPWDFV
AATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPR
AMGWQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKP
GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRI
RKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMT
AKEAHTSKQAKQAIVDAPGVDDDQWENTYKRPTGGVITVLSEMGEPIHKL
ATRGVLFWKELDDKIFSLDRSKRVAELKKRRDYIIKKLNDDFQKVWFGRN
SAGEPVDLEDMTYAEVVHRMVELMYVKHEKRWIDPSLKKLTGDFIRRVEE
RFTSVEGQPSLLQNYSDLDEPYPAVDRILAAYPEASTQLINAQDVQHFLL
LCQRRGQKPVPFVPALDENFEYWFKKDSLWQSEDIEAVYGQDVGRTCILQ
GPVAAKYSKVIDEPIKDILDGIHNDHIKFLLRDLYDGKEENVPVIEYFGG
RILKATDEEPDIDGLTASRDANKISYRLSNAPSANLPDVDSFMQLIAGNS
YSWRHAMFTTEVFVQGHRFQTNPLKRLFAPTRGMYVEITNPDDPAKTVIS
VREPSQSAKLVKTVEIKLVGDNEIALTLFEGRTAEGGVVPLTFRFTYHPE
AGYAPIREVMEGRNDRIKEFYYRVWFAEKEVPFDTPLTAVFDGGREIVNA
QAVADFVHAVGNTGEAFVDRGKDFFAPMDFAIVVGWKAITKPIFPRKIDG
DLLKLVHLSNGYRMVPGAEPLKVGDVLDTTAQINAVINQDSGKMVEVCGT
LKRDGKPVMYVTSQFLYRGVYTDYENTFQRKDEVPMQLHIATPQDLAVLR
SKEWFKLDDQHDIELLGQTLVFRLQSLVRFKNKNVYSSVQTIGQVLLELP
TKEIIQVASVDYEAGESHGNPVIDYLQRHGSSIEQPVNFENPIPLSGKTP
LELRAPASNENYARVSGDYNPIHVSRVFSSYANLPGTITHGMYTSAAVRS
LVETWAAENNIGRVRSYHVNMVGMVLPNDAITVKLEHVGMIAGRKIIKVD
ARNKDTDESVLQGEAEVEQPVTAYVFTGQGSQEQGMGMDLYATSPVAKEV
WDRADKHFRENYGFSIIDIVKNNPKELTVHFGGPRGKIIRQNYMSMTFET
VNADGSIKTEKIFKEVDENSTSYTYRSPSGLLSATQFTQPALTLMEKASF
EDMRSKGLVQRDSTFAGHSLGEYSALVALADVMPIESLVSVVFYRGLTMQ
VAVERDEQGRSNYAMCAVNPSRISPTFTEQALQYVVENIAEVTGWLLEIV
NYNVANMQYVAAGDLRALDTLANVLNILKMQKIDIQALMQSMSLEDVRAH
LVEIIQECRKQTEAKPQPVQLERGFATIPLRGIDVPFHSTFLRSGVKPFR
SFLLKKINKTTIDPSKLIGKYIPNVTAKPFEISKEYFEEVHRLTGSPKIA
NILANWDKYE
3D structure
PDB4v59 Structure of Fungal Fatty Acid Synthase and Implications for Iterative Substrate Shuttling
ChainH
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FMN H G607 M608 T609 P610 N661 K717 T744 G749 S780 G781 G813 S814 L1067 G589 M590 T591 P592 N643 K699 T726 G731 S762 G763 G795 S796 L1049
BS02 NAP H T609 Y636 H751 D952 K1026 P1027 K1044 D1045 L1067 T591 Y618 H733 D934 K1008 P1009 K1026 D1027 L1049
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Wed Nov 27 18:50:48 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4v59', asym_id = 'H', title = 'Structure of Fungal Fatty Acid Synthase and Implications for Iterative Substrate Shuttling'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4v59', asym_id='H', title='Structure of Fungal Fatty Acid Synthase and Implications for Iterative Substrate Shuttling')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0004312,0004313,0004314,0004318,0005835,0006633,0016740,0019171', uniprot = '', pdbid = '4v59', asym_id = 'H'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004312,0004313,0004314,0004318,0005835,0006633,0016740,0019171', uniprot='', pdbid='4v59', asym_id='H')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>