Structure of PDB 4qpq Chain H

Receptor sequence
>4qpqH (length=51) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
AKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVHE
A
3D structure
PDB4qpq Mechanistic Basis of Plasmid-Specific DNA Binding of the F Plasmid Regulatory Protein, TraM.
ChainH
Resolution3.106 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna H K3 N5 Y7 K2 N4 Y6 PDBbind-CN: Kd=0.2uM
BS02 dna H S34 F35 S36 S33 F34 S35 PDBbind-CN: Kd=0.2uM
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:4qpq, PDBe:4qpq, PDBj:4qpq
PDBsum4qpq
PubMed25284757
UniProtP10026|TRAM1_ECOLI Relaxosome protein TraM (Gene Name=traM)

[Back to BioLiP]