Structure of PDB 4pel Chain H

Receptor sequence
>4pelH (length=557) Species: 580 (Kluyvera cryocrescens) [Search protein sequence]
CNMWVIGKNKAQDAKAIMVNGPQFGWYAPAYTYGIGLHGAGYDVTGNTPF
AYPGLVFGHNGTISWGSTAGFGDDVDIFAEKLSAEKPGYYQHNGEWVKML
SRKETIAVKDGQPETFTVWRTLHGNVIKTDTATQTAYAKARAWDGKEVAS
LLAWTHQMKAKNWPEWTQQAAKQALTINWYYADVNGNIGYVHTGAYPDRQ
PGHDPRLPVPGTGKWDWKGLLSFDLNPKVYNPQSGYIANWNNSPQKDYPA
SDLFAFLWGGADRVTEIDTTLDKQPRFTADQAWDVIRQTSRRDLNLRLFL
PALKDATANLAENDPRRQLVDKLASWDGENLVNDDGKTYQQPGSAILNAW
LTSMLKRTVVAAVPAPFGKWYSASGYETTQDGPTGSLNISVGAKILYEAL
QGDKSPIPQAVDLFGGKPQQEVILAALDDAWQTLSKRYGNDVTGWKTPAM
ALTFRANNFFGVPQAAAKEARHQAEYQNRGTENDMIVFSPTSGNRPVLAW
DVVAPGQSGFIAPDGKADKHYDDQLIMYESFGRKSLWLTPQDVDEHKESQ
EVLQVQR
3D structure
PDB4pel Penicillin G acylase
ChainH
Resolution2.8 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) C1 A69 N241
Catalytic site (residue number reindexed from 1) C1 A69 N241
Enzyme Commision number 3.5.1.11: penicillin amidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA H D73 V75 D76 P205 D252 D73 V75 D76 P205 D252
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Biological Process
GO:0017000 antibiotic biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4pel, PDBe:4pel, PDBj:4pel
PDBsum4pel
PubMed
UniProtA0A068F6N5

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