Structure of PDB 4odt Chain H

Receptor sequence

>4odtH (length=226) Species: 10090 (Mus musculus) [Search protein sequence]

EVQLVESGGGLVQPKGSLKLSCAASGFTFNTYAMNWVRQAPGKGLEWVAR
IRSKSNNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVR
HRGAPLYYGNGAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGCGDTTGSSV
TSGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSS
TWPSETVTCSVAHPASSTTVDKKLEP

3D structure

PDB

4odt Structural Basis for Antibody Recognition of Lipid A: INSIGHTS TO POLYSPECIFICITY TOWARD SINGLE-STRANDED DNA.

Chain

Resolution

1.95 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	GP1	H	Y32 G97 A98 Y100B	Y32 G103 A104 Y108
BS02	Z9M	H	Y32 A33 R52 R96 G97	Y32 A33 R52 R102 G103

External links

PDB	RCSB:4odt, PDBe:4odt, PDBj:4odt
PDBsum	4odt
PubMed	26085093

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