Structure of PDB 4jo2 Chain H

Receptor sequence

>4jo2H (length=204) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

QSLEESGGDLVQPGASLTLTCKASGFSFGNNYDMCWVRQAPGKGLEWIGC
IETGSSDSAAYATWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARNF
DLWGPGTLVIVSSGQPKAPSVFPLAPCSTVTLGCLVKGYLPEPVTVTWNS
GTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDK
TVAP

3D structure

PDB

4jo2 Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	D34 C50 E52 S56 N95 F96	D33 C50 E52 S58 N99 F100
BS02	CA	H	A58 Y59	A60 Y61

External links

PDB	RCSB:4jo2, PDBe:4jo2, PDBj:4jo2
PDBsum	4jo2
PubMed	23864637

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