Structure of PDB 4jo1 Chain H

Receptor sequence

>4jo1H (length=213) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

QSLEESGGDLVQPGASLTLTCKASGFSFGNNYDMCWVRQAPGKGLEWIGC
IETGSSDSAAYATWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARNF
DLWGPGTLVIVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPV
TVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPAT
NTKVDKTVAPSTC

3D structure

PDB

4jo1 Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.

Chain

Resolution

2.033 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	H	D34 C50 S56 N95	D33 C50 S58 N99
BS02	CA	H	E46 W47	E46 W47
BS03	CA	H	A58 Y59	A60 Y61

External links

PDB	RCSB:4jo1, PDBe:4jo1, PDBj:4jo1
PDBsum	4jo1
PubMed	23864637

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