Structure of PDB 4gaj Chain H

Receptor sequence

>4gajH (length=209) Species: 10090 (Mus musculus) [Search protein sequence]

EVQLQESGPSLVKPSQTLSLTCSVTGDTSGYWNWIRKFPGNKLEYMGYIS
YSGSTYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALITTTT
YAMDYWGQGTSVTVSSAKTTPPSVYPLAPNSMVTLGCLVKGYFPEPVTVT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASS
TKVDKKIVP

3D structure

PDB

4gaj Toward a Hepatitis C Virus Vaccine: the Structural Basis of Hepatitis C Virus Neutralization by AP33, a Broadly Neutralizing Antibody.

Chain

Resolution

2.51 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	Y33 Y50 Y58 Y100	Y31 Y48 Y56 Y101

External links

PDB	RCSB:4gaj, PDBe:4gaj, PDBj:4gaj
PDBsum	4gaj
PubMed	22993159

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