Structure of PDB 4gag Chain H

Receptor sequence

>4gagH (length=212) Species: 10090 (Mus musculus) [Search protein sequence]

EVQLQESGPSLVKPSQTLSLTCSVTGDSITSGYWNWIRKFPGNKLEYMGY
ISYSGSTYYNLSLRSRISITRDTSKNQYYLQLNSVTTEDTATYYCALITT
TTYAMDYWGQGTSVTVSSAKTTPPSVYPLAPNSMVTLGCLVKGYFPEPVT
VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPA
SSTKVDKKIVPR

3D structure

PDB

4gag Toward a Hepatitis C Virus Vaccine: the Structural Basis of Hepatitis C Virus Neutralization by AP33, a Broadly Neutralizing Antibody.

Chain

Resolution

1.8 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	Y33 Y50 Y58 T97 Y100	Y33 Y50 Y58 T100 Y103

External links

PDB	RCSB:4gag, PDBe:4gag, PDBj:4gag
PDBsum	4gag
PubMed	22993159

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