Structure of PDB 3ob0 Chain H

Receptor sequence

>3ob0H (length=220) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVAS
ISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKG
SDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSGGTAALGCLVKD
YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
ICNVNHKPSNTKVDKKVEPK

3D structure

PDB

3ob0 A nonself sugar mimic of the HIV glycan shield shows enhanced antigenicity.

Chain

Resolution

2.85 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	H	A31 L100 S100A D100B	A31 L104 S105 D106
BS02	YYH	H	A31 H32 T33 K95 G96 S100A D100B N100C D100D	A31 H32 T33 K99 G100 S105 D106 N107 D108

External links

PDB	RCSB:3ob0, PDBe:3ob0, PDBj:3ob0
PDBsum	3ob0
PubMed	20852065

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