Structure of PDB 3mly Chain H

Receptor sequence

>3mlyH (length=230) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLQESGPGLVKPSETLSLTCTVSGGSISGFHWSWIRQPPGKGLEYIGY
IYYSGSTSYNPSLKSRVSMSVDTSRNQFSLELSSVTAADTAVYYCARDFG
EYHYDGRGFQCEGFDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTA
ALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS
SSLGTQTYICNVNHKPSNTKVDKKVEPKSC

3D structure

PDB

3mly Conserved structural elements in the V3 crown of HIV-1 gp120.

Chain

Resolution

1.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	S30 G31 F32 Y52 Y53 R94 F96 G97 E98 Y99 H100 Y100A F100F D101	S30 G31 F32 Y52 Y53 R97 F99 G100 E101 Y102 H103 Y104 F109 D115

External links

PDB	RCSB:3mly, PDBe:3mly, PDBj:3mly
PDBsum	3mly
PubMed	20622876

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