Structure of PDB 3m85 Chain H

Receptor sequence
>3m85H (length=258) Species: 2234 (Archaeoglobus fulgidus) [Search protein sequence]
MPEDILVDIKRDYVLSKLRDNERIDGRGFDEFRKVEIIPNVIEKAEGSAL
VKLGDTQVVVGVKMQPGEPAPDTPDRGVIIVNAELVPLASPTFEPGPPDE
NSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLD
ASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDP
SREEMSVGDTTLTITTDKDDNVVAMQKSGGYLLDEKLFDELLDVSINCAR
KLREKFKE
3D structure
PDB3m85 Quantitative analysis of processive RNA degradation by the archaeal RNA exosome
ChainH
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.13.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H R107 R114 R107 R114
Gene Ontology
Biological Process
GO:0006401 RNA catabolic process
GO:0016075 rRNA catabolic process
Cellular Component
GO:0000177 cytoplasmic exosome (RNase complex)
GO:0000178 exosome (RNase complex)
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:3m85, PDBe:3m85, PDBj:3m85
PDBsum3m85
PubMed20392821
UniProtO29756|RRP42_ARCFU Exosome complex component Rrp42 (Gene Name=rrp42)

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