Structure of PDB 3j80 Chain H

Receptor sequence
>3j80H (length=184) Species: 28985 (Kluyveromyces lactis) [Search protein sequence]
PQAKILSQAPTELELQVAQAFIDLENNSPELKADLRALQFKSIREIEVAG
GKKALAVFVPVPSLAAYHKVQIKLTRELEKKFQDRHVIFLAERRILPKPS
RKSRQTQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKIL
LNSKDVQHIDNKLESFQAVYNKLTGKQIVFEIPS
3D structure
PDB3j80 Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
ChainH
Resolution3.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna H P63 R96 R97 I98 P100 K101 R104 K105 R107 Q108 Q110 K111 R112 P113 R114 S115 R116 T117 L118 T119 K148 L176 P60 R93 R94 I95 P97 K98 R101 K102 R104 Q105 Q107 K108 R109 P110 R111 S112 R113 T114 L115 T116 K145 L173
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006364 rRNA processing
GO:0006412 translation
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:0032040 small-subunit processome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3j80, PDBe:3j80, PDBj:3j80
PDBsum3j80
PubMed25417110
UniProtQ6CTD6

[Back to BioLiP]