Structure of PDB 3f58 Chain H

Receptor sequence

>3f58H (length=228) Species: 10090 (Mus musculus) [Search protein sequence]

DVQLQQSGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMG
YIHYSAGTNYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCAREE
AMPYGNQAYYYAMDCWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVT
LGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSP
RPSETVTCNVAHPASSTKVDKKIVPRDC

3D structure

PDB

3f58 Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs.

Chain

Resolution

2.8 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	Y33 H52 G56 T57 E95 Y100G	Y33 H53 G57 T58 E99 Y111

External links

PDB	RCSB:3f58, PDBe:3f58, PDBj:3f58
PDBsum	3f58
PubMed	10368281

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