Structure of PDB 2or9 Chain H

Receptor sequence

>2or9H (length=221) Species: 10090 (Mus musculus) [Search protein sequence]

EVHLVESGGDLVKPGGSLKLSCAASGFTFSHYGMSWVRQTPDKRLEWVAT
IGSRGTYTHYPDSVKGRFTISRDNDKNALYLQMNSLKSEDTAMYYCARRS
EFYYYGNTYYYSAMDYWGQGASVTVSSAKTTPPSVYPLAPGSSMVTLGCL
VKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSE
TVTCNVAHPASSTKVDKKIVP

3D structure

PDB

2or9 The structure of the anti-c-myc antibody 9E10 Fab fragment/epitope peptide complex reveals a novel binding mode dominated by the heavy chain hypervariable loops.

Chain

Resolution

2.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	H31 Y32 G52 S52A S96 E97 F98 Y99 Y100 Y100A T100D Y100F	H31 Y32 G52 S53 S100 E101 F102 Y103 Y104 Y105 T108 Y110

External links

PDB	RCSB:2or9, PDBe:2or9, PDBj:2or9
PDBsum	2or9
PubMed	18473392

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