Structure of PDB 1nam Chain H

Receptor sequence
>1namH (length=275) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRWE
3D structure
PDB1nam CDR3 loop flexibility contributes to the degeneracy of TCR recognition
ChainH
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide H Y7 V9 R62 E63 K66 N70 F74 D77 Y84 S99 Y116 T143 K146 W147 E152 R155 L156 Y159 W167 Y171 Y7 V9 R62 E63 K66 N70 F74 D77 Y84 S99 Y116 T143 K146 W147 E152 R155 L156 Y159 W167 Y171
External links
PDB RCSB:1nam, PDBe:1nam, PDBj:1nam
PDBsum1nam
PubMed12563259
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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