Structure of PDB 7oyb Chain G2

Receptor sequence

>7oybG2 (length=230) Species: 7955 (Danio rerio)

MKLNISFPATGCQKLIEVDDERKLRIFYEKRMATEVAADSLGDEWKGYVV
RISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGC
IVDANLSVLNLVIVRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFNLSKE
DDVRQYVVRRPLTKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTL
KNKEAAAEYTKLLAKRMKEAKEKRQEQIAK

3D structure

• PDB: 7oyb A molecular network of conserved factors keeps ribosomes dormant in the egg.
• Chain: G2
• Resolution: 2.4 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G2	N4 S6 P8 Q13 L15 R31 A33 N56 K58 Q59 G60 F61 P62 Q65 G66 R72 L75 L76 C83 Y84 R85 R87 R88 T89 G90 R92 R94 S96 S107 V108 N110 R131 R132 L133 G134 P135 K136 R137 S139 R140 L162 T163 K164 R170 K172 P174 K175 Q177 R178 R183 Q186 R189 R190 R191 K195 R198	N4 S6 P8 Q13 L15 R31 A33 N56 K58 Q59 G60 F61 P62 Q65 G66 R72 L75 L76 C83 Y84 R85 R87 R88 T89 G90 R92 R94 S96 S107 V108 N110 R131 R132 L133 G134 P135 K136 R137 S139 R140 L162 T163 K164 R170 K172 P174 K175 Q177 R178 R183 Q186 R189 R190 R191 K195 R198

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:7oyb, PDBe:7oyb, PDBj:7oyb
• PDBsum: 7oyb
• PubMed: 36653451
• UniProt: Q6DHL6