Structure of PDB 8zv9 Chain G

Receptor sequence

>8zv9G (length=276) Species: 9606 (Homo sapiens) [Search protein sequence]

VDGSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPR
APWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMM
FGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWE
AAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE
ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVV
VPSGEEQRYTCHVQHEGLPKPLTLRW

3D structure

PDB

8zv9 Structural insights into immune escape at killer T cell epitope by SARS-CoV-2 Spike Y453F variants.

Chain

Resolution

2.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	G	Y7 E63 K66 V67 H70 T73 E76 N77 I80 L95 M97 F99 Y116 Y123 T143 K146 W147 Q155 Q156 Y159 T163 R170 Y171	Y9 E65 K68 V69 H72 T75 E78 N79 I82 L97 M99 F101 Y118 Y125 T145 K148 W149 Q157 Q158 Y161 T165 R172 Y173

External links

PDB	RCSB:8zv9, PDBe:8zv9, PDBj:8zv9
PDBsum	8zv9
PubMed	39002680
UniProt	A0A7T3RIT5

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