Structure of PDB 8yhd Chain G

Receptor sequence

>8yhdG (length=234) Species: 256318 (metagenome) [Search protein sequence]

IKGILESITGFSIPLDNGEYALYPAGRHLRGAIGYIAFNLDLPISSKFLD
FDFDDIIFRDLLPISKCGKIFYPEKNSNSLKCPSCNIYGSSVLRNIMARG
LSYKEVIEGKKYRLSIIVKDEKYLNEMEAIIRYILSYGIYLGNKVSKGYG
KFKIKEYSIVDILPVKDSEVLLLSDAIIDNGEKDIVFSKKEISSSKFEII
RKRGKAKGDIIRDNNHNGFYIGYGGLGFGEIISL

3D structure

PDB

8yhd Structural basis for the activity of the type VII CRISPR-Cas system.

Chain

Resolution

2.93 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	P17 L18 R30 H31 G34 A35 G37 Y38 F41 F51 L52 M101 R103 L105 Y144 L145 N147 V149 K151 V190 S192 K193 K194 E195 I196 F201	P14 L15 R27 H28 G31 A32 G34 Y35 F38 F48 L49 M97 R99 L101 Y140 L141 N143 V145 K147 V186 S188 K189 K190 E191 I192 F197
BS02	ZN	G	C70 C85 C88	C67 C82 C85

External links

PDB	RCSB:8yhd, PDBe:8yhd, PDBj:8yhd
PDBsum	8yhd
PubMed	39143216

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