Structure of PDB 8v84 Chain G

Receptor sequence
>8v84G (length=164) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence]
KVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEG
KSKQDASPKPYAVKYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPAL
CKKMGVPYAIVKGKARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTID
ANFADKYDEVKKHW
3D structure
PDB8v84 The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
ChainG
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna G K105 K106 R108 S126 K128 P129 K133 Y134 G135 L136 N137 H138 A141 N145 K147 D158 L162 K183 A184 K193 T194 A196 K36 K37 R39 S57 K59 P60 K64 Y65 G66 L67 N68 H69 A72 N76 K78 D89 L93 K114 A115 K124 T125 A127
BS02 rna G R84 K181 R15 K112
BS03 rna G E89 A212 E20 A143
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000470 maturation of LSU-rRNA
GO:0002181 cytoplasmic translation
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8v84, PDBe:8v84, PDBj:8v84
PDBsum8v84
PubMed38632236
UniProtP17076|RL8A_YEAST Large ribosomal subunit protein eL8A (Gene Name=RPL8A)

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