Structure of PDB 8q5i Chain G

Receptor sequence

>8q5iG (length=206) Species: 5476 (Candida albicans) [Search protein sequence]

LQVVELATTIPLDVQEAQREVKLFNKWSFEDVEVKDVSLVDYIQIRNPVF
VSHTAGKYASKRFRKAQCPIVERLTNSLMMNGRNNGKKLKAVRIVKHALE
IIHVLTEQNPIQVVVDAIVNSGAREDSTRIGSSGTVRRQAVDVSPLRRVN
QAIALLTIGAREASFRNIKTIAECLAEELINAAKGSSTSYAIKKKDELER
VAKSNR

3D structure

PDB

8q5i Structural characterization of cephaeline binding to the eukaryotic ribosome using Cryo-Electron Microscopy

Chain

Resolution

2.45 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	H72 A78 K80 R81 K84 R92 N95 L97 M98 M99 N100 G101 R102 N103 N104 G105 K106 K107 K109 S152 R166 N169 R180 S183 F184 R185 I187 T189 I190	H53 A59 K61 R62 K65 R73 N76 L78 M79 M80 N81 G82 R83 N84 N85 G86 K87 K88 K90 S133 R147 N150 R161 S164 F165 R166 I168 T170 I171

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8q5i, PDBe:8q5i, PDBj:8q5i
PDBsum	8q5i
PubMed
UniProt	A0A8H6BS29

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