Structure of PDB 8ozg Chain G

Receptor sequence

>8ozgG (length=473) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence]

MKELIYIEEPKILFAHGQKCTDARDGLALFGPLNNLYGIKSGVIGTKQGL
KIFRDYLDHIQKPIYNSNSITRPMFPGFEAVFDCKWESTGITFKEVTNED
IGKFLYNSSTHKRTYDLVSLFIDKIISANKNEDENVDVWFVIVPDEIYKY
CRPNSVLPKEMVQTTYNYDAQFHDQFKARLLKHTIPTQIFRESTLAWRDF
KNAFGLPIRDFSKIEGHLAWTISTAAFYKAGGKPWKLSDVRNGVCYLGLV
YKKVEKSKNPRNACCAAQMFLDNGDGTVFKGEVGPWYNPKNGQYHLEPKE
AKALLSQSLQSYKEQIGEYPKEVFIHAKTRFNHQEWDAFLEVTPKETNLV
GVTISKTKPLKLYKTEGDYTILRGNAYVVNERSAFLWTVGYVPKIQTALS
MEVPNPLFIEINKGEADIKQVLKDILSLTKLNYNACIFADGEPVTLRFAD
KIGEILTASTDIKTPPLAFKYYI

3D structure

PDB

8ozg Activation mechanism of a short argonaute-TIR prokaryotic immune system.

Chain

Resolution

3.37 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	Y148 Q205 H207 Q222 I223 F224 R225 T228 L252 T255 N325 G326 K390 S434 E436 N439 N468 A469 I471 G475 R481 I507	Y148 Q171 H173 Q188 I189 F190 R191 T194 L218 T221 N291 G292 K356 S400 E402 N405 N434 A435 I437 G441 R447 I473
BS02	dna	G	R72 P153 N154 I248 H251 K286 K287 Y328 K362 T363 R364	R72 P153 N154 I214 H217 K252 K253 Y294 K328 T329 R330

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding

View graph for
Molecular Function

External links

PDB	RCSB:8ozg, PDBe:8ozg, PDBj:8ozg
PDBsum	8ozg
PubMed	37467330
UniProt	A0A316E3U6

[Back to BioLiP]