Structure of PDB 8ka0 Chain G

Receptor sequence
>8ka0G (length=404) Species: 672 (Vibrio vulnificus) [Search protein sequence]
SLVAARAEKVANLYRWLDTDNDVATDKYVPVPGFERVDVDVSDEVKQRMI
QSMSGYIEHTDNQVPKDQAEALATLFVESTLDYDWDKRVEFLTKLESYGY
SFEAPHAEKSIVSFWSGKNFKQYRDILDNAQTDGKKVVYDIDVKGNAFAI
DLNKHLMRWGGLFLDPDNAEQNQLKSSIDAATFSNTGFWSSVYATGAQND
VYVIAEGGVRLGNYFWNVQLPALRQLQREGLVGEIRLLDKPVSEYKDLPA
DQIGRRLTDAGVAVKVRFDALSHERQAELLADNPDGYKADTLVELDVKLS
AIDSMLRESLPFYSLRTERNLLVQEGEEGFEVRSWPGIDGKSKTILLDNP
EDAAQQKSIERFILANFDNFEQMPDELFLVDNKVLSHHDGRTRIIAQKED
GAWT
3D structure
PDB8ka0 Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin and a nicotinamide adenine dinucleotide (NAD+)
ChainG
Resolution2.35 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD G F2001 F2081 W2082 S2083 D2107 I2117 F2150 T2153 S2157 R2177 N2180 Y2181 F2182 Q2186 F34 F114 W115 S116 D140 I150 F183 T186 S190 R210 N213 Y214 F215 Q219
External links
PDB RCSB:8ka0, PDBe:8ka0, PDBj:8ka0
PDBsum8ka0
PubMed39043696
UniProtA0A2S3R7M0|MARTX_VIBVL Multifunctional-autoprocessing repeats-in-toxin (Gene Name=CRN52_02910)

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