Structure of PDB 8k27 Chain G

Receptor sequence

>8k27G (length=302) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]

TKLKAPAVLAYSRKINPTNALMFAVNWSDRDNTTAVMVGTKTVAGTQSVR
GNPNDADKGNIQTVNFANLPHNKNTLLVKYNVKFVGDVFKAELGGGEYSN
TLQTALENTDFGTLAYRYVYNIAAGRTLWRNRVGAESIETVITVNDQTFT
FSDLLVNEFDEDVDVAEIADMVAGVLSGEGFVTLKVEHYMLLGEGSEVFP
SQEFVENSKLSKQLFDLNGQAAMHDQKIGNAIRTIDTWYEDATTPIAVEP
YGSVVRNGVAYRAGNKTDLFTLMDGAVNGKSLTEEDQMFVTANLIRGGVF
GG

3D structure

PDB

8k27 Structure of csy complex with short DNA

Chain

Resolution

3.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	Y12 S13 R14 A45 T47 N61 L94 W130 R131 Q203 F205 Q227 K228 N231 R234 R257 G298 G299 V300	Y11 S12 R13 A44 T46 N60 L93 W129 R130 Q202 F204 Q226 K227 N230 R233 R256 G297 G298 V299
BS02	dna	G	A8 Q48 N61 I62 Q63 V300	A7 Q47 N60 I61 Q62 V299

External links

PDB	RCSB:8k27, PDBe:8k27, PDBj:8k27
PDBsum	8k27
PubMed
UniProt	F1D5V6

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