Structure of PDB 8ibd Chain G

Receptor sequence
>8ibdG (length=687) Species: 10090 (Mus musculus) [Search protein sequence]
SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMC
LVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDC
PICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQ
CTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNVIDICPV
GALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMH
EDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDALSRVAG
MLQNFEGNAVAAIAGGLVDAEALVALKDLLNKVDSDNLCTEEIFPTEGAG
TDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLK
VALIGSPVDLTYRYDHLGDSPKILQDIASGRHSFCEVLKDAKKPMVVLGS
SALQRDDGAAILVAVSNMVQKIRVTTGVAAEWKVMNILHRIASQVAALDL
GYKPGVEAIRKNPPKMLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAP
MADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSE
IAGITLPYDTLDQVRNRLEEVSPNLVRYDDIEETNYFQQASELAKLVNQE
VLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVT
3D structure
PDB8ibd Respiratory complex CI:CIII2, type II, Wild type mouse under cold temperature
ChainG
Resolution4.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SF4 G H124 C128 C131 Q133 C137 H96 C100 C103 Q105 C109
BS02 SF4 G C176 I177 C179 T180 C182 C226 C148 I149 C151 T152 C154 C198
BS03 FES G R62 F63 C64 G73 C75 R76 C78 C92 R34 F35 C36 G45 C47 R48 C50 C64
External links
PDB RCSB:8ibd, PDBe:8ibd, PDBj:8ibd
PDBsum8ibd
PubMed
UniProtQ91VD9|NDUS1_MOUSE NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (Gene Name=Ndufs1)

[Back to BioLiP]