Structure of PDB 7syp Chain G

Receptor sequence

>7sypG (length=191) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRK
AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV
NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAF
RNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR

3D structure

PDB

7syp Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.

Chain

Resolution

4.0 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	H51 R60 K63 N74 M77 H79 G80 N82 N83 G84 K86 M88 N148 R159 A162 F163 R164 N165 I166 T168 I169	H38 R47 K50 N61 M64 H66 G67 N69 N70 G71 K73 M75 N135 R146 A149 F150 R151 N152 I153 T155 I156
BS02	rna	G	R130 G132 V134 R135 S184 N186 K191	R117 G119 V121 R122 S171 N173 K178

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005634	nucleus
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022626	cytosolic ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:7syp, PDBe:7syp, PDBj:7syp
PDBsum	7syp
PubMed	35822879
UniProt	G1TFM5\|RS5_RABIT Small ribosomal subunit protein uS7 (Gene Name=RPS5)

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