Structure of PDB 7oqe Chain G

Receptor sequence
>7oqeG (length=239) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
QSFDIWKNLDRIRSTKKNAGQFIKGSLLILPMRTEDKQQFDECMDELHKY
ISKDILRCYPQKEQKDEGMLFYIVLKDFNILDSCFVLSVLLAFQKRLWMA
PSEKSYFRVPKNINLTGSFYLPKNIETGSSIVEVGFNVVPDFQQFQVKAC
HVSKFMNELSNFFSQVEFGKCEANVINYFKREYNRTYSQISLALYELPLI
GDGLFDIKSYISKTRPIIETSKAQMIKHISEMKAYNEIS
3D structure
PDB7oqe Structural insights into how Prp5 proofreads the pre-mRNA branch site.
ChainG
Resolution5.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna G N166 I167 K226 N124 I125 K170
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
Biological Process
GO:0000395 mRNA 5'-splice site recognition
GO:0000398 mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0000243 commitment complex
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005685 U1 snRNP
GO:0071004 U2-type prespliceosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7oqe, PDBe:7oqe, PDBj:7oqe
PDBsum7oqe
PubMed34349264
UniProtQ03782|SNU56_YEAST 56 kDa U1 small nuclear ribonucleoprotein component (Gene Name=SNU56)

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