Structure of PDB 7jn3 Chain G

Receptor sequence
>7jn3G (length=210) Species: 269446 (Rous sarcoma virus (strain Schmidt-Ruppin A)) [Search protein sequence]
PRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAV
QHHWATAIAVLGRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQ
GQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNHFER
GENTKTPIQKHGPPVKIRIETGEWEKGWNVLVWGRGYAAVKNRDTDKVIW
VPSRKVKPDI
3D structure
PDB7jn3 Cryo-EM structure of the Rous sarcoma virus octameric cleaved synaptic complex intasome.
ChainG
Resolution3.21 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna G Y246 W259 Y187 W200
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Biological Process
GO:0015074 DNA integration

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7jn3, PDBe:7jn3, PDBj:7jn3
PDBsum7jn3
PubMed33712691
UniProtP03354|POL_RSVP Gag-Pol polyprotein (Gene Name=gag-pol)

[Back to BioLiP]