Structure of PDB 7aqd Chain G

Receptor sequence
>7aqdG (length=175) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
SRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNVL
TVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKSG
NKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIRA
VRSPEPYKGKGIRYEGEVVRRKEGK
3D structure
PDB7aqd Mimicry of Canonical Translation Elongation Underlies Alanine Tail Synthesis in RQC.
ChainG
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna G S2 V4 K7 R36 H39 K60 R63 A64 G67 T68 S71 N75 Y110 S111 H112 K139 E140 Y158 K173 K176 S1 V3 K6 R35 H38 K59 R62 A63 G66 T67 S70 N74 Y109 S110 H111 K138 E139 Y157 K172 K175
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:7aqd, PDBe:7aqd, PDBj:7aqd
PDBsum7aqd
PubMed33259811
UniProtP46898|RL6_BACSU Large ribosomal subunit protein uL6 (Gene Name=rplF)

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