Structure of PDB 6pij Chain G

Receptor sequence

>6pijG (length=511) Species: 666 (Vibrio cholerae) [Search protein sequence]

LKEIIASNPDDLTTELKRAFRPLTPHIAIDGNEIDALTILVNLTDKAKCK
QKLRDEKWWASCINCVNYRQSHNPKFPDIRSEGVIRTQALGELPSFLLSS
SKIPPYHWSYSHDSKYVNKSAFLTNEFCWDGEISCLGELLKDADHPLWNT
LKKLGCSQKTCKAMAKQLADITLTTINVTLAPNYLTQISLPDSDTSYISL
SPVASLSMQSHFHQRLQDENRHSAITRFSRTTNMGVTAMTCGGAFRMLKS
GAKFSSPPHHRLNNGSFLVLPNIRVCGATALSSPVTVGIPSLTAFFGFVH
AFERNINRTTSSFRVESFAICVHQLHVEKRGLTAEFVEKGDGTISAPATR
DDWQCDVVFSLILNTNFAQHIDQDTLVTSLPKRLARGSAKIAIDDFKHIN
SFSTLETAIESLPIEAGRWLSLYAQSNNNLSDLLAAMTEDHQLMASCVGY
HLLEEPKDKPNSLRGYKHAIAECIIGLINSITFSSETDPNTIFWSLKNYQ
NYLVVQPRSIN

3D structure

PDB

6pij Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system.

Chain

Resolution

2.9 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	G	F92 T202 Q203 I204 S205 Y213 P218 V219 A220 S414 T416 A417 F421 H423 R427 T456 E458 R506 L507 A508 R509 Y573 L586 R587 Y589	F76 T186 Q187 I188 S189 Y197 P202 V203 A204 S291 T293 A294 F298 H300 R304 T333 E335 R383 L384 A385 R386 Y450 L463 R464 Y466
BS02	dna	G	K91 I95 H128 D129 K131 R246 N249 K462 A469 T472	K75 I79 H112 D113 K115 R230 N233 K339 A346 T349
BS03	dna	G	K23 R24 R27 K52 S130 K131 N134 M255	K17 R18 R21 K46 S114 K115 N118 M239

External links

PDB	RCSB:6pij, PDBe:6pij, PDBj:6pij
PDBsum	6pij
PubMed	31853065

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