Structure of PDB 6dmf Chain G

Receptor sequence
>6dmfG (length=512) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
DPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTLD
NNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSII
TDTYGDAPFSEAGLNPKYDKQEDIYNAFFLELEDAVNKIDPTKDKVTGDL
IYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGGVITDA
SSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLCSTFFN
QLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFSPRDPG
AYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKSDNPGV
VMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNYGCTAT
TDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANVRRSGY
PKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIERMGGTD
NWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainG
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC G E60 R95 E21 R56
BS02 BGC G N78 N281 N39 N235
BS03 BGC G W77 D282 W38 D236
BS04 MG G R492 D555 E557 R446 D509 E511
External links