Structure of PDB 6bok Chain G

Receptor sequence

>6bokG (length=202) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]

MYQIPVLSPSGRRELAADLPAEINPHLLWEVVRWQLAKRRRGTASTKTRG
EVAYSGRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKV
RKKGLAMAVADRAREGKLLLVEAFAGVNGKTKEFLAWAKEAGLDGSESVL
LVTGNELVRRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAWEVFQNR
IG

3D structure

PDB

6bok Conformational Control of Translation Termination on the 70S Ribosome.

Chain

Resolution

3.55 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	N29 H31 L32 W34 R38 Q40 L41 R44 R45 R46 T48 S50 T51 K52 T53 R54 V57 A58 Y59 S60 G61 R62 K63 Q67 K68 H69 G71 R72 A73 R74 H75 P81 I82 F83 V84 G85 V88 V89 F90 P92 R95 Y99 T100 P102 K103 K104 V105 R106 K107 K108 K135 R165 R168 N169 P171 E179 G180 Y184 R205	N24 H26 L27 W29 R33 Q35 L36 R39 R40 R41 T43 S45 T46 K47 T48 R49 V52 A53 Y54 S55 G56 R57 K58 Q62 K63 H64 G66 R67 A68 R69 H70 P76 I77 F78 V79 G80 V83 V84 F85 P87 R90 Y94 T95 P97 K98 K99 V100 R101 K102 K103 K130 R160 R163 N164 P166 E174 G175 Y179 R200
BS02	MG	G	V89 F90	V84 F85

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:6bok, PDBe:6bok, PDBj:6bok
PDBsum	6bok
PubMed	29731232
UniProt	Q72I05\|RL4_THET2 Large ribosomal subunit protein uL4 (Gene Name=rplD)

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