Structure of PDB 5ymw Chain G

Receptor sequence
>5ymwG (length=271) Species: 9031 (Gallus gallus) [Search protein sequence]
MELHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTARRYVPRTEW
IAAKADQQYWDGQTQIGQGNEQIDRENLGILQRRYNQTGGSHTVQWMYGC
DILEGGPIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESE
PERWKNYLEETCVEWLRRYVEYGKAELGRRERPEVRVWGKEADGILTLSC
RAHGFYPRPIVVSWLKDGAVRGQDAHSGGIVPNGDGTYHTWVTIDAQPGD
GDKYQCRVEHASLPQPGLYSW
3D structure
PDB5ymw An Invariant Arginine in Common with MHC Class II Allows Extension at the C-Terminal End of Peptides Bound to Chicken MHC Class I.
ChainG
Resolution1.997 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide G Y7 Q62 I65 N69 I72 E75 N76 W95 Y97 T140 K143 W144 E149 R152 W153 Y156 W164 Y168 Y8 Q63 I66 N70 I73 E76 N77 W96 Y98 T141 K144 W145 E150 R153 W154 Y157 W165 Y169
External links
PDB RCSB:5ymw, PDBe:5ymw, PDBj:5ymw
PDBsum5ymw
PubMed30341185
UniProtP15979|HA1F_CHICK Class I histocompatibility antigen, F10 alpha chain

[Back to BioLiP]